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Glitches brought to you by 
Extra MVP points
(This must be done from the Play Now! Option)
In order to receive lots of MVP points, simply do this:
1) Begin the game on Rookie, preferable against a AA team.
2) Play through the game, making sure to get lots of hits, stolen bases, etc.
3) Make sure the starting pitcher completes the game.
4) When your opponent is down to their last out, go into game options and switch the difficulty to MVP.
5) Get the last guy out to get lots of MVP points.
Pitch every game in a season with one pitcher
To play every game with one pitcher play one game, then, before starting the next game, edit anything about the pitcher by going into Team Management > Rosters > Create/Edit Player > Edit Player. Open that player's edit screen, edit him and save the changes by pressing Start. His stamina will be completely full.
Send Runner back to 3rd
As one of your players crosses home, quickly press R. The run will still count, but in the next AB, the runner will be back on 3rd. However, if you try to do this with bases loaded, the game will freeze.